6-(7-Nitro-benzo[2,1,3]oxadiazol-4-ylamino)-hexanoyl-Arg-Pro-Lys-Pro-Leu-Ala-Nva-Trp-Lys((7-dimethylaminocoumarin-4-yl)-acetyl)-NH2
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6-(7-Nitro-benzo[2,1,3]oxadiazol-4-ylamino)-hexanoyl-Arg-Pro-Lys-Pro-Leu-Ala-Nva-Trp-Lys((7-dimethylaminocoumarin-4-yl)-acetyl)-NH2

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It is an excellent fluorogenic substrate for matrix metalloproteinase stromelysin (MMP-3) hydrolysis. The FRET substrate shows high sensitivity and improves accuracy at a lower substrate turnover. It has a kcat/Km value of 2.14·104 M-1s-1 and can be easily detected at 350 nm (excitation) and 465 nm (emission). Therefore, it is a suitable tool for high-throughput inhibitor screening.

Category
Others
Catalog number
BAT-014402
CAS number
945414-97-1
Molecular Formula
C78H111N21O16
Molecular Weight
1598.87
IUPAC Name
(2S)-1-[(2S)-6-amino-2-[[(2S)-1-[(2S)-5-(diaminomethylideneamino)-2-[6-[(4-nitro-2,1,3-benzoxadiazol-7-yl)amino]hexanoylamino]pentanoyl]pyrrolidine-2-carbonyl]amino]hexanoyl]-N-[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-amino-6-[[2-[7-(dimethylamino)-2-oxochromen-4-yl]acetyl]amino]-1-oxohexan-2-yl]amino]-3-(1H-indol-3-yl)-1-oxopropan-2-yl]amino]-1-oxopentan-2-yl]amino]-1-oxopropan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]pyrrolidine-2-carboxamide
Synonyms
NBD-ε-aminocaproyl-Arg-Pro-Lys-Pro-Leu-Ala-Nva-Trp-Lys(DMACA)-NH2; L-Lysinamide, N2-[6-[(7-nitro-2,1,3-benzoxadiazol-4-yl)amino]-1-oxohexyl]-L-arginyl-L-prolyl-L-lysyl-L-prolyl-L-leucyl-L-alanyl-L-norvalyl-L-tryptophyl-N6-[2-[7-(dimethylamino)-2-oxo-2H-1-benzopyran-4-yl]acetyl]-; NBD-Arg-Pro-Lys-Pro-Leu-Ala-Nva-Trp-Lys(DMC)-NH2; N2-{6-[(7-Nitro-2,1,3-benzoxadiazol-4-yl)amino]hexanoyl}-L-arginyl-L-prolyl-L-lysyl-L-prolyl-L-leucyl-L-alanyl-L-norvalyl-L-tryptophyl-N6-{[7-(dimethylamino)-2-oxo-2H-chromen-4-yl]acetyl}-L-lysinamide
Purity
≥95%
Density
1.43±0.1 g/cm3 (Predicted)
Sequence
NBD-RPKPLA-Nva-WK(DMC)-NH2
Storage
Store at -20°C
Solubility
Soluble in DMSO
InChI
InChI=1S/C78H111N21O16/c1-7-20-55(71(105)92-59(40-48-44-86-52-22-11-10-21-50(48)52)73(107)89-54(69(80)103)23-13-16-35-84-65(101)41-47-42-66(102)114-63-43-49(96(5)6)29-30-51(47)63)90-70(104)46(4)87-72(106)58(39-45(2)3)93-75(109)62-27-19-38-98(62)77(111)57(24-12-14-33-79)91-74(108)61-26-18-37-97(61)76(110)56(25-17-36-85-78(81)82)88-64(100)28-9-8-15-34-83-53-31-32-60(99(112)113)68-67(53)94-115-95-68/h10-11,21-22,29-32,42-46,54-59,61-62,83,86H,7-9,12-20,23-28,33-41,79H2,1-6H3,(H2,80,103)(H,84,101)(H,87,106)(H,88,100)(H,89,107)(H,90,104)(H,91,108)(H,92,105)(H,93,109)(H4,81,82,85)/t46-,54-,55-,56-,57-,58-,59-,61-,62-/m0/s1
InChI Key
SCMRYUWYMBCNED-AHVFAWDSSA-N
Canonical SMILES
CCCC(C(=O)NC(CC1=CNC2=CC=CC=C21)C(=O)NC(CCCCNC(=O)CC3=CC(=O)OC4=C3C=CC(=C4)N(C)C)C(=O)N)NC(=O)C(C)NC(=O)C(CC(C)C)NC(=O)C5CCCN5C(=O)C(CCCCN)NC(=O)C6CCCN6C(=O)C(CCCN=C(N)N)NC(=O)CCCCCNC7=CC=C(C8=NON=C78)[N+](=O)[O-]
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