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Boc-Aeg-OEt

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A backbone for PNA synthesis.

Category
Backbones
Catalog number
BAT-014370
CAS number
72648-80-7
Molecular Formula
C11H22N2O4
Molecular Weight
246.31
Boc-Aeg-OEt
IUPAC Name
ethyl 2-[2-[(2-methylpropan-2-yl)oxycarbonylamino]ethylamino]acetate
Synonyms
Ethyl 2-((2-((tert-butoxycarbonyl)amino)ethyl)amino)acetate; N-[2-(tert-Butoxycarbonylamino)ethyl]glycine Ethyl Ester; N-(N-beta-Boc-aminoethyl)-Gly-Oet
Appearance
White to Off-white Powder
Purity
98%
Density
1.0±0.1 g/cm3
Melting Point
116-119°C
Boiling Point
352.0±27.0 °C at 760 mmHg
Storage
-20°C for long term storage
InChI
InChI=1S/C11H22N2O4/c1-5-16-9(14)8-12-6-7-13-10(15)17-11(2,3)4/h12H,5-8H2,1-4H3,(H,13,15)
InChI Key
WVFXXOLKYIPCAX-UHFFFAOYSA-N
Canonical SMILES
CCOC(=O)CNCCNC(=O)OC(C)(C)C
1.Extension of the PNA world by functionalized PNA monomers eligible candidates for inverse Diels Alder Click Chemistry.
Wiessler M1, Waldeck W, Pipkorn R, Kliem C, Lorenz P, Fleischhacker H, Hafner M, Braun K. Int J Med Sci. 2010 Jun 27;7(4):213-23.
Progress in genome research led to new perspectives in diagnostic applications and to new promising therapies. On account of their specificity and sensitivity, nucleic acids (DNA/RNA) increasingly are in the focus of the scientific interest. While nucleic acids were a target of therapeutic interventions up to now, they could serve as excellent tools in the future, being highly sequence-specific in molecular diagnostics. Examples for imaging modalities are the representation of metabolic processes (Molecular Imaging) and customized therapeutic approaches ("Targeted Therapy"). In the individualized medicine nucleic acids could play a key role; this requires new properties of the nucleic acids, such as stability. Due to evolutionary reasons natural nucleic acids are substrates for nucleases and therefore suitable only to a limited extent as a drug. To use DNA as an excellent drug, modifications are required leading e.g. to a peptide nucleic acid (PNA).
2.Synthesis, characterisation and bioimaging of a fluorescent rhenium-containing PNA bioconjugate.
Gasser G1, Pinto A, Neumann S, Sosniak AM, Seitz M, Merz K, Heumann R, Metzler-Nolte N. Dalton Trans. 2012 Feb 28;41(8):2304-13. doi: 10.1039/c2dt12114j. Epub 2011 Dec 20.
A new rhenium tricarbonyl complex of a bis(quinoline)-derived ligand (2-azido-N,N-bis((quinolin-2-yl)methyl)ethanamine, L-N(3)), namely [Re(CO)(3)(L-N(3))]Br was synthesized and characterized in-depth, including by X-ray crystallography. [Re(CO)(3)(L-N(3))]Br exhibits a strong UV absorbance in the range 300-400 nm with a maximum at 322 nm, and upon photoexcitation, shows two distinct emission bands at about 430 and 560 nm in various solvents (water, ethylene glycol). [Re(CO)(3)(L-N(3))]Br could be conjugated, on a solid phase, to a peptide nucleic acid (PNA) oligomer using the copper(I)-catalyzed azide-alkyne cycloaddition reaction (Cu-AAC, "click" chemistry) and an alkyne-containing PNA building block to give Re-PNA. It was demonstrated that upon hybridisation with a complementary DNA strand (DNA), the position of the maxima and emission intensity for the hybrid Re-PNA·DNA remained mainly unchanged compared to those of the single strand Re-PNA.
3.Enhancement of the click chemistry for the inverse Diels Alder technology by functionalization of amide-based monomers.
Pipkorn R1, Wiessler M, Waldeck W, Lorenz P, Muehlhausen U, Fleischhacker H, Koch M, Braun K. Int J Med Sci. 2011;8(5):387-96. Epub 2011 Jun 21.
In the near future personalized medicine with nucleic acids will play a key role in molecular diagnostics and therapy, which require new properties of the nucleic acids, like stability against enzymatic degradation. Here we demonstrate that the replacement of nucleobases with PNA by functional molecules harbouring either a dienophile or a diene reactivity is feasible and confers all new options for functionalization. These newly developed derivatives allow independent multi-ligations of multi-faceted components by use of the inverse Diels Alder technology. The high chemical stability and the ease of synthesis qualify these polyamide building blocks as favourites for intracellular delivery and targeting applications. This allows local drug concentrations sufficient for imaging and therapy and simultaneously a reduction of the application doses. It is important to point out that this technology is not restricted to ligation of medicament material; it is also a candidate to develop new and highly efficient active compounds for a "sustainable pharmacy".
4.Sequential insertion of three different organometallics into a versatile building block containing a PNA backbone.
Patra M1, Gasser G, Bobukhov D, Merz K, Shtemenko AV, Metzler-Nolte N. Dalton Trans. 2010 Jun 28;39(24):5617-9. doi: 10.1039/c003598j. Epub 2010 May 19.
In the view of developing a synthetic route for the controlled insertion of distinct organometallic moieties into peptide nucleic acid (PNA) oligomers, a proof-of-principle study of the chemoselective insertion of three different organometallics into a building block containing both a PNA backbone and an alkyne side-chain is presented in this study.
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