D-Alanine methyl ester hydrochloride
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D-Alanine methyl ester hydrochloride

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Category
D-Amino Acids
Catalog number
BAT-003473
CAS number
14316-06-4
Molecular Formula
C4H9NO2.HCl
Molecular Weight
139.58
D-Alanine methyl ester hydrochloride
IUPAC Name
methyl (2R)-2-aminopropanoate;hydrochloride
Synonyms
D-Alanine, methyl ester, hydrochloride (1:1); D-Ala-OMe HCl; Methyl D-alaninate hydrochloride; D-Alanine, methyl ester, monohydrochloride; Alanine, methyl ester, hydrochloride, D-; (R)-1-(Methoxycarbonyl)ethylamine hydrochloride; (R)-2-Aminopropionic acid methyl ester hydrochloride; (R)-Alanine methyl ester hydrochloride; (R)-Methyl 2-aminopropanoate hydrochloride; Methyl (R)-2-aminopropanoate hydrochloride; NSC 523192
Related CAS
21705-13-5 (free base)
Appearance
White crystalline powder
Purity
≥95%
Melting Point
95-97°C
Storage
Store at 2-8°C
InChI
InChI=1S/C4H9NO2.ClH/c1-3(5)4(6)7-2;/h3H,5H2,1-2H3;1H/t3-;/m1./s1
InChI Key
IYUKFAFDFHZKPI-AENDTGMFSA-N
Canonical SMILES
CC(C(=O)OC)N.Cl

D-Alanine methyl ester hydrochloride, a versatile chemical compound with diverse applications in various bioscience domains. Delve into the key applications of D-Alanine methyl ester hydrochloride, presented with a high degree of perplexity and burstiness:

Enzyme Substrate: In the realm of enzymatic reactions, D-Alanine methyl ester hydrochloride emerges as a pivotal substrate, shedding light on enzyme kinetics and mechanisms. Researchers harness this compound to track the activity of D-amino acid oxidase enzymes, contributing to unraveling enzyme specificity nuances and designing potent enzyme inhibitors for therapeutic pursuits.

Peptide Synthesis: A cornerstone in peptide synthesis, D-Alanine methyl ester hydrochloride acts as a crucial building block for peptides and peptidomimetics, paving the way for the creation of intricate molecular structures. By integrating this compound into peptide chains, scientists craft peptides with tailored properties, propelling advancements in peptide-based drug development and biochemical assays.

Antibiotic Research: At the forefront of antibiotic research, D-Alanine assumes a pivotal role in bacterial cell wall synthesis, with derivatives like D-Alanine methyl ester hydrochloride driving investigations into new antibiotic strategies. Scientists leverage this compound to delve into bacterial cell wall biosynthesis intricacies, striving to craft antibiotics that disrupt this process and combat resistant bacterial strains, ushering in a new era of antimicrobial discovery.

Chiral Reagent: Unveiling its prowess as a chiral reagent, D-Alanine methyl ester hydrochloride fuels stereoselective synthesis endeavors, culminating in the creation of optically active compounds crucial for elucidating chiral drug interactions and pharmacodynamics. This application stands as a cornerstone for producing enantiomerically pure active pharmaceutical ingredients (APIs), shaping the landscape of pharmaceutical research and development.

1.Enantiomeric recognition of amino acid salts by macrocyclic crown ethers derived from enantiomerically pure 1,8,9,16-tetrahydroxytetraphenylenes
J Org Chem. 2013 Sep 6;78(17):8562-73. doi: 10.1021/jo401240k.
Asymmetric synthesis of (R,R)- and (S,S)-1,8,9,16-tetrahydroxytetraphenylenes was achieved from starting material (2R,3R)-butane-2,3-diol and (2S,3S)-butane-2,3-diol respectively by utilizing a center-to-axis strategy. A series of crown ether compounds 20, 24, and 25 and their corresponding enantiomers derived from chiral tetrahydroxytetraphenylene were synthesized in enantiomerically pure forms. Enantiomeric recognition properties of these hosts toward l- and d-amino acid methyl ester hydrochloride were studied by the UV spectroscopy titration. The tetramer hosts (S,S,S,S,S,S,S,S)-20 and (R,R,R,R,R,R,R,R)-20 exhibited the best enantioselectivities toward L- and D-alanine methyl ester hydrochloride salt with K(L)/K(D) = 4.1 and KD/KL = 3.9, respectively. The new chiral macrocyclic hosts would further enrich the host-guest chemistry.
2.Identification of small peptide analogues having agonist and antagonist activity at the platelet thrombin receptor
Biochem Pharmacol. 1988 Jun 15;37(12):2417-26. doi: 10.1016/0006-2952(88)90369-3.
Two tripeptide analogues (N-[3-methyl-1-S[[2-S [(methyl-amino)carbonyl]-1-pyrrolidinyl] carbonyl]butyl-D-analine) (SC40476) and N-[3-methyl-S-(1-pyrrolidinylcarbonyl)butyl]-D-alanine, ethyl ester, hydrochloride (SC42619], inhibit aggregation of, and secretion from, human platelets induced by thrombin but cause no significant inhibition of esterolysis or fibrin formation catalysed by this enzyme. Inhibition by SC40476 of the aggregatory response induced by thrombin is incomplete. Neither peptide analogue inhibits aggregation induced by ADP, collagen, vasopressin or 11,9-epoxymethanoprostaglandin H2 (U-46619). Enhancement of the response is observed when nonsaturating concentrations of these agonists are employed. SC42619 causes a parallel shift to the right in the concentration-response curve describing aggregation induced by thrombin. The Schild plot of these data has a slope of 1.05 and the pA2 is 2.9 +/- 0.1. Both SC40476 and SC42619 induced a small but significant decrease in the single platelet content of platelet suspensions. Neither peptide analogue increases platelet cytosolic [Ca2+] measured using quin 2 or Fura 2. Both analogues cause inhibition of the increase in cytosolic [Ca2+] induced by thrombin. Inhibition by SC42619 is competitive with respect to thrombin when the extracellular [Ca2+] is reduced to less than 0.1 microM but is non-competitive in the presence of 1 mM Ca2+. SC42619 also inhibits the increase in cytosolic [Ca2+]induced by ADP in the presence of 1 mM Ca2+ but not the smaller increase caused by this agonist when the medium contains less than 0.1 microM Ca2+. SC42619 inhibits Mn2+ influx induced by thrombin and ADP. SC40476 and SC42619 inhibit the enhanced incorporation of [32P] into phosphatidic acid observed on stimulation by thrombin of platelets pre-labelled with [32P]-phosphate. Addition of the peptide analogues alone fails to increase significantly the 32P content of phosphatidate, phosphatidylcholine, phosphatidylserine or phosphatidylethanolamine. SC40476 causes no detectable hydrolysis of glycoprotein V as detected by release of the proteolytic product (glycoprotein VFR). The results indicate that SC40476 and SC42619 interact selectively with the platelet thrombin receptor. Both peptide analogues act as effective antagonists for this receptor but also possess weak agonist activity which may also result from interaction with the thrombin receptor. The molecular basis for this latter activity has not been defined. SC42619 non-selectively inhibits Ca2+ influx induced by several agonists but this effect does not appear to contribute to the observed inhibition of the aggregatory and secretory responses.
3.Thrombin receptor antagonists. Structure-activity relationships for the platelet thrombin receptor and effects on prostacyclin synthesis by human umbilical vein endothelial cells
Biochem Pharmacol. 1990 Jan 15;39(2):373-81. doi: 10.1016/0006-2952(90)90037-l.
Structure-activity studies on a series of analogues of N-(3-methyl-S-(1-pyrrolidinyl carbonyl) butyl)-D-alanine ethyl ester hydrochloride (SC42619) have defined the features of this dipeptide analogue required for observation of thrombin receptor antagonist activity on the human platelet. The affinity for SC42619, and for its structural analogue SC43583 is enhanced by pretreatment of the platelets with chymotrypsin. Endothelial cell prostacyclin (PGI2) synthesis induced by thrombin and trypsin is selectively inhibited by SC42619 provided that prolonged exposure to this antagonist is avoided. However inhibition of PGI2 synthesis by SC42619 is not overcome by increasing the thrombin concentration. The data provide further support for identification of SC42619 and certain of its analogues as selective antagonists at the platelet thrombin receptor but suggest that these compounds may have more complex, and possibly non-selective effects on the endothelial cell.
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