L-Cyclopentylglycine
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L-Cyclopentylglycine

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Category
L-Amino Acids
Catalog number
BAT-005583
CAS number
2521-84-8
Molecular Formula
C7H13NO2
Molecular Weight
143.10
L-Cyclopentylglycine
IUPAC Name
(2S)-2-amino-2-cyclopentylacetic acid
Synonyms
Gly(cyclopentyl)-OH; (S)-Amino-cyclopentyl-acetic acid
Appearance
White powder
Purity
≥ 99% (Assay)
Density
1.11 g/cm3
Storage
Store at 2-8°C
InChI
InChI=1S/C7H13NO2/c8-6(7(9)10)5-3-1-2-4-5/h5-6H,1-4,8H2,(H,9,10)/t6-/m0/s1
InChI Key
XBPKRVHTESHFAA-LURJTMIESA-N
Canonical SMILES
C1CCC(C1)C(C(=O)O)N
1. Cyanogenesis in glucosinolate-producing plants: Carica papaya and Carica quercifolia
Elin S Olafsdottir, Lise Bolt Jørgensen, Jerzy W Jaroszewski Phytochemistry. 2002 Jun;60(3):269-73. doi: 10.1016/s0031-9422(02)00106-1.
(R)-2-(beta-D-Glucopyranosyloxy)-2-phenylacetonitrile (prunasin) was isolated from Carica papaya L. and C. quercifolia (A. St.-Hil.) Hieron. (syn. C. hastata Brign.). Earlier reported presence of cyclopentanoid cyanohydrin glycosides in C. papaya could not be confirmed, and no cyclopentanoid amino acids could be detected in extracts of C. papaya and C. quercifolia. Conversion of [2,3,4,5,6-3H]phenylalanine into tritiated prunasin was demonstrated in both species. On the other hand, when the plants were administered [2-14C]-2-(2'cyclopentenyl)glycine, extracted, and the extracts hydrolyzed with beta-glucosidase (Helix pomatia), formation of labelled cyanide was not observed. The absence of cyclopentanoids, which are typical for the Passifloraceae, and the inability of Carica species to utilize 2-(2'-cyclopentenyl)glycine as a precursor of cyanogenic glycosides are in agreement with the relative phylogenetic position of the Caricaceae and the Passifloraceae. Carica species are thus rare examples of taxa in which glucosinolates and cyanogenic glycosides co-occur, both types of natural products being derived from the same amino acid, phenylalanine.
2. Synthesis of epimers of L-cyclopentenylglycine using enzymatic resolution
L Andersen, B Nielsen, J W Jaroszewski Chirality. 2000 Oct;12(9):665-9. doi: 10.1002/1520-636X(2000)12:93.0.CO;2-U.
Both epimers of the naturally occurring nonproteinogenic amino acid L-cyclopentenylglycine, (2S,1'S)- and (2S, 1'R)-2-(cyclopent-2'-enyl)glycine, were obtained via a procedure involving condensation of 3-chlorocyclopentene with diethyl acetylaminomalonate, deethoxycarbonylation, chromatographic separation of the resulting two pairs of enantiomers, and enzymatic resolution of the racemates employing enantioselective hydrolysis of the ethyl ester group with alpha-chymotrypsin. The method was used for preparation of (13)C-labeled compounds of interest for biosynthetic tracer experiments. Enantiomeric purity of the products was determined by chiral HPLC on a Crownpak CR(+) column. The biologically active (2S,1'R) isomer was obtained as a pure compound and characterized for the first time. The (2R,1'R) and (2R,1'S) isomers were obtained as N-acetyl ethyl ester derivatives.
3. Plant analysis by butterflies: occurrence of cyclopentenylglycines in Passifloraceae, Flacourtiaceae, and Turneraceae and discovery of the novel nonproteinogenic amino acid 2-(3'-cyclopentenyl)glycine in Rinorea
Vicki Clausen, Karla Frydenvang, Ricarda Koopmann, Lise Bolt Jørgensen, Daniel K Abbiw, Patrick Ekpe, Jerzy W Jaroszewski J Nat Prod. 2002 Apr;65(4):542-7. doi: 10.1021/np010572c.
Following records about feeding habits of nymphalid butterflies, a novel nonproteinogenic L-amino acid, (S)-2-(3'-cyclopentenyl)glycine (11), was discovered in Rinorea ilicifolia, a species where the presence of a cyclopentanoid natural product of this kind was neither known nor anticipated from the taxonomic point of view. Another novel amino acid, (2S,1'S,2'S)-2-(2'-hydroxy-3'-cyclopentenyl)glycine (12), the stereochemistry of which was determined by single-crystal X-ray diffraction, was shown to occur in species belonging to Flacourtiaceae, Passifloraceae, and Turneraceae. These species, many of which serve as hosts for nymphalid butterflies (Acraeinae, Heliconiinae, Argynninae), also produce 2-(2'-cyclopentenyl)glycine. Cyclopentenylglycines are proposed to be novel chemical recognition templates for plant-insect interactions. Ratios between the epimers of (2S)-2-(2'-cyclopentenyl)glycine, which co-occur in plants, were determined by (1)H NMR spectroscopy. Contrary to a previous report, the (2S,1'R) epimer always appears to predominate over the (2S,1'S) epimer. Stereochemical aspects of biosynthesis of natural cyclopentanoid cyanogenic glycosides are discussed in relation to these findings.
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