MCA-SEVNLDAEFR-K(Dnp)-RR, amide
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MCA-SEVNLDAEFR-K(Dnp)-RR, amide

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It is a FRET-based substrate.

Category
Others
Catalog number
BAT-010531
CAS number
438625-61-7
Molecular Formula
C86H125N27O29
Molecular Weight
2001.08
MCA-SEVNLDAEFR-K(Dnp)-RR, amide
IUPAC Name
(4S)-5-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-amino-5-carbamimidamido-1-oxopentan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-6-(2,4-dinitroanilino)-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-4-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-4-amino-2-[[(2S)-2-[[(2S)-4-carboxy-2-[[(2S)-3-hydroxy-2-[(4-methyl-2-oxochromen-7-yl)amino]propanoyl]amino]butanoyl]amino]-3-methylbutanoyl]amino]-4-oxobutanoyl]amino]-4-methylpentanoyl]amino]-3-carboxypropanoyl]amino]propanoyl]amino]-5-oxopentanoic acid
Synonyms
Mca-(Asn670, Leu671)-APP770(667-676)-Lys(Dnp)-Arg-Arg amide; MCA-Ser-Glu-Val-Asn-Leu-Asp-Ala-Glu-Phe-Arg-Lys(Dnp)-Arg-Arg-NH2; Mca-(Asn670, Leu671)-Amyloid beta/A4 Protein Precursor770(667-676)-Lys(Dnp)-Arg-Arg amide
Purity
≥95%
Density
1.5±0.1 g/cm3
Sequence
MCA-SEVNLDAEFR-K(Dnp)-RR-NH2
Storage
Store at -20°C
Solubility
Soluble in DMSO
InChI
InChI=1S/C84H123N27O27/c1-41(2)33-56(105-79(131)58(38-63(85)113)108-81(133)68(42(3)4)109-75(127)55(26-28-65(116)117)104-80(132)60(40-112)98-46-21-23-48-43(5)34-67(120)138-62(48)36-46)77(129)107-59(39-66(118)119)76(128)97-44(6)70(122)100-54(25-27-64(114)115)74(126)106-57(35-45-15-8-7-9-16-45)78(130)103-53(20-14-32-96-84(91)92)73(125)101-51(17-10-11-29-93-49-24-22-47(110(134)135)37-61(49)111(136)137)72(124)102-52(19-13-31-95-83(89)90)71(123)99-50(69(86)121)18-12-30-94-82(87)88/h7-9,15-16,21-24,34,36-37,41-42,44,50-60,68,93,98,112H,10-14,17-20,25-33,35,38-40H2,1-6H3,(H2,85,113)(H2,86,121)(H,97,128)(H,99,123)(H,100,122)(H,101,125)(H,102,124)(H,103,130)(H,104,132)(H,105,131)(H,106,126)(H,107,129)(H,108,133)(H,109,127)(H,114,115)(H,116,117)(H,118,119)(H4,87,88,94)(H4,89,90,95)(H4,91,92,96)/t44-,50-,51-,52-,53-,54-,55-,56-,57-,58-,59-,60-,68-/m0/s1
InChI Key
HHMIGPXJCFTNAI-MZNMFFTKSA-N
Canonical SMILES
CC1=CC(=O)OC2=C1C=CC(=C2)NC(CO)C(=O)NC(CCC(=O)O)C(=O)NC(C(C)C)C(=O)NC(CC(=O)N)C(=O)NC(CC(C)C)C(=O)NC(CC(=O)O)C(=O)NC(C)C(=O)NC(CCC(=O)O)C(=O)NC(CC3=CC=CC=C3)C(=O)NC(CCCNC(=N)N)C(=O)NC(CCCCNC4=C(C=C(C=C4)[N+](=O)[O-])[N+](=O)[O-])C(=O)NC(CCCNC(=N)N)C(=O)NC(CCCNC(=N)N)C(=O)N
1. Modular, triple-resonance, transmission line DNP MAS probe for 500 MHz/330 GHz
Marcel Reese, Christy George, Chen Yang, Sudheer Jawla, J Tassilo Grün, Harald Schwalbe, Christina Redfield, Richard J Temkin, Robert G Griffin J Magn Reson. 2019 Oct;307:106573. doi: 10.1016/j.jmr.2019.106573. Epub 2019 Aug 14.
We describe the design and construction of a modular, triple-resonance, fully balanced, DNP-MAS probe based on transmission line technology and its integration into a 500 MHz/330 GHz DNP-NMR spectrometer. A novel quantitative probe design and characterization strategy is developed and employed to achieve optimal sensitivity, RF homogeneity and excellent isolation between channels. The resulting three channel HCN probe has a modular design with each individual, swappable module being equipped with connectorized, transmission line ports. This strategy permits attachment of a mating connector that facilitates accurate impedance measurements at these ports and allows characterization and adjustment (e.g. for balancing or tuning/matching) of each component individually. The RF performance of the probe is excellent; for example, the 13C channel attains a Rabi frequency of 280 kHz for a 3.2 mm rotor. In addition, a frequency tunable 330 GHz gyrotron operating at the second harmonic of the electron cyclotron frequency was developed for DNP applications. Careful alignment of the corrugated waveguide led to minimal loss of the microwave power, and an enhancement factor ε = 180 was achieved for U-13C urea in the glassy matrix at 80 K. We demonstrated the operation of the system with acquisition of multidimensional spectra of cross-linked lysozyme crystals which are insoluble in glycerol-water mixtures used for DNP and samples of RNA.
2. Formation of helical protein assemblies of IgG and transducin on varied lipid tubules
T J Melia, M E Sowa, L Schutze, T G Wensel J Struct Biol. 1999 Dec 1;128(1):119-30. doi: 10.1006/jsbi.1999.4151.
Helical protein arrays on lipid tubules are valuable assemblies for studying protein structure and protein-lipid interactions through electron microscopy and crystallography. We describe conditions for forming such arrays from two proteins, IgG and transducin, the photoreceptor G protein, using a variety of lipid surfaces. Anti-dinitrophenyl (DNP) IgG arrays formed on DNP-phosphatidylethanolamine (DNP-PE) mixed with either galactosyl-ceramide lipids or phosphatidylcholine (PC) display different pH sensitivities and dimensions, yet have similar helical symmetries. DNP-PE/PC mixtures formed small crystals and large well-ordered flattened tubules. The peripheral membrane protein transducin (G(t)) formed helical arrays either on a mixture of cationic and neutral lipids or on residual photoreceptor lipids. Despite differences in lipid composition, the G(t) arrays have similar structures and show similar sensitivity to activation and variations in ionic environment. G(t) activation causes the helical assemblies to collapse to small vesicles, a process resembling the vesiculation of activated dynamin-lipid tubules. In a preliminary three-dimensional reconstruction, the hapten-bound IgG appears to make two contacts to the central lipid tubule, presumably via the F(ab) domains. The ability to generate a three-dimensional reconstruction without tilts illustrates one advantage of helical structures for two-dimensional crystallography, especially for visualizing protein-lipid interactions.
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