Nα-Benzoyl-DL-arginine hydrochloride
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Nα-Benzoyl-DL-arginine hydrochloride

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Category
DL-Amino Acids
Catalog number
BAT-003619
CAS number
125652-40-6
Molecular Formula
C13H18N4O3·HCl
Molecular Weight
314.80
Nα-Benzoyl-DL-arginine hydrochloride
IUPAC Name
(2S)-2-benzamido-5-(diaminomethylideneamino)pentanoic acid;hydrochloride
Synonyms
Bz-DL-Arg-OH HCl; (2S)-2-benzamido-5-(diaminomethylideneamino)pentanoic acid hydrochloride; Nalpha-Benzoyl-DL-arginine hydrochloride
Appearance
White powder
Purity
≥ 99% (TLC)
Storage
Store at 2-8 °C
InChI
InChI=1S/C13H18N4O3.ClH/c14-13(15)16-8-4-7-10(12(19)20)17-11(18)9-5-2-1-3-6-9;/h1-3,5-6,10H,4,7-8H2,(H,17,18)(H,19,20)(H4,14,15,16);1H
InChI Key
LSLUHKRVLRTIBV-UHFFFAOYSA-N
Canonical SMILES
C1=CC=C(C=C1)C(=O)NC(CCCN=C(N)N)C(=O)O.Cl

Nα-Benzoyl-DL-arginine hydrochloride is a biochemical reagent widely employed in various aspects of biochemical and clinical research. Here are some key applications of Nα-Benzoyl-DL-arginine hydrochloride:

Enzyme Assays: Nα-Benzoyl-DL-arginine hydrochloride is commonly used as a substrate in enzyme assays, particularly for proteases like trypsin. By monitoring the hydrolysis of Nα-Benzoyl-DL-arginine, researchers can quantify enzyme activity and kinetics. This application is critical for studying enzyme mechanisms and screening for inhibitors.

Diagnostic Reagents: In clinical diagnostics, Nα-Benzoyl-DL-arginine hydrochloride is utilized in tests to measure protease levels, which can be indicative of certain diseases. For example, it helps in the assessment of pancreatic function by measuring trypsin activity in biological fluids. This provides valuable information for diagnosing and monitoring conditions such as pancreatitis.

Pharmaceutical Formulation: Nα-Benzoyl-DL-arginine hydrochloride can be used in the formulation of therapeutic drugs targeting proteases. Its interaction with enzyme active sites helps in understanding enzyme inhibition and guiding the design of potent inhibitors. This aids in the development of drugs for diseases where protease activity is dysregulated.

Protein Structure Studies: Researchers use Nα-Benzoyl-DL-arginine hydrochloride in structural biology to study enzyme-substrate interactions. By crystallizing enzymes with this substrate, scientists can obtain detailed structural information about the enzyme's active site. These insights contribute to rational drug design and the development of targeted therapeutics.

1. Insight into the inactivation mechanism of soybean Bowman-Birk trypsin inhibitor (BBTI) induced by epigallocatechin gallate and epigallocatechin: Fluorescence, thermodynamics and docking studies
Zhongqin Chen, Yue Chen, Zihan Xue, Xudong Gao, Yanan Jia, Yajie Wang, Yangpeng Lu, Jianying Zhang, Min Zhang, Haixia Chen Food Chem. 2020 Jan 15;303:125380. doi: 10.1016/j.foodchem.2019.125380. Epub 2019 Aug 19.
Soybean Bowman-Birk trypsin inhibitor (BBTI), an antinutritional factor of soy products, could strongly inhibit the protein digestion. The inactivation effect and mechanism of BBTI induced by tea polyphenols (TPs) and its major components (EGCG and EGC), were investigated in this study using fluorescence, FTIR, CD spectroscopy, isothermal titration calorimetry (ITC) and molecular docking. EGCG and EGC interacted with BBTI via static quenching process and hydrophobic interaction, with binding constant (Ka) of 2.19 × 103 M-1 and 0.25 × 103 M-1 at 298 K, respectively. TPs, EGCG and EGC induced a transition of BBTI conformation from disorder to order. ITC analysis and molecular docking revealed the interaction of EGCG-BBTI and EGC-BBTI were spontaneous, and hydrophobic interactions and hydrogen bonds were the predominant forces. Overall, this study clearly suggested that EGCG could be a promising inactivating agent for BBTI, which could also improve the safety and nutritional value of soy products.
2. Purification and characterization of an extracellular trypsin-like protease of Fusarium oxysporum var. lini
Ricardo Andrade Barata, Milton Hercules Guerra Andrade, Roberta Dias Rodrigues, Ieso Miranda Castro J Biosci Bioeng. 2002;94(4):304-8. doi: 10.1263/jbb.94.304.
An alkaline serineprotease, capable of hydrolyzing Nalpha-benzoyl- dl arginine p-nitroanilide, was secreted by Fusarium oxysporum var. lini grown in the presence of gelatin as the sole nitrogen and carbon source. The protease was purified 65-fold to electrophoretic homogenity from the culture supernatant in a three-step procedure comprising QSepharose chromatography, affinity chromatography, and FPLC on a MonoQ column. SDS-PAGE analysis of the purified protein indicated an estimated molecular mass of 41 kDa. The protease had optimum activity at a reaction temperature of 45 degrees C and showed a rapid decrease of activity at 48 degrees C. The optimum pH was around 8.0. Characterization of the protease showed that Ca2+ and Mg2+ cations increased the activity, which was not inhibited by EDTA or 1,10-phenanthroline. The enzyme activity on Nalpha-benzoyl-DL arginine p-nitroanilide was inhibited by 4-(2-aminoethyl)-benzenesulfonyl fluoride hydrochloride, p-aminobenzamidine dihydrochloride, aprotinin, 3-4 dichloroisocoumarin, and N-tosyl-L-lysine chloromethyl ketone. The enzyme is also inhibited by substrate concentrations higher than 2.5 x 10(-4)M. The protease had a Michaelis-Menten constant of 0.16 mM and a V(max) of 0.60 mumol released product.min(-1).mg(-1) enzyme when assayed in a non-inhibiting substrate concentration. The activity on Nalpha-benzoyl- dl arginine p-nitroanilide was competitively inhibited by p-aminobenzamidine dihydrochoride. A K(i) value of 0.04 mM was obtained.
3. TLC-Bioautography as a fast and cheap screening method for the detection of α-chymotrypsin inhibitors in crude plant extracts
Barbora Legerská, Daniela Chmelová, Miroslav Ondrejovič J Biotechnol. 2020 Apr 10;313:11-17. doi: 10.1016/j.jbiotec.2020.02.016. Epub 2020 Feb 29.
TLC-Bioautography is a fast and effective method for assessing the inhibitory effect of compounds present in plant extracts against microbial species. However, this method has a hidden, currently underutilized potential for evaluating the presence of inhibitory compounds against selected enzymes. The aim of this work was to design a functional TLC-Bioautography method for the evaluation of protease inhibitors present in plant extracts. The method is based on the hydrolysis of Nα-benzoyl-DL-arginine-p-nitroanilide hydrochloride (BApNA) by α-chymotrypsin as a representative serine protease to produce coloured para-nitroaniline (pNA). Derivatization of pNA with both sodium nitrite and N-(1-naphthyl) ethylenediamine (NPED) leads to the formation of a pink azo dye. This step improves the resolution of active compounds on the chromatogram, which appear as light spots on a pink background. The developed method was tested for the analysis of protease inhibitors in different plant materials such as grape pomace from Vitis vinifera, Picea abies bark, Hippophae rhamnoides berries, Hordeum sativum bran, Triticum aestivum bran and Avena sativa bran. Plant extracts, which could not be analysed by a commonly used spectrophotometric method due to interference, were assessed by this method.
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