Pentafluorophenyl Trifluoroacetate
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Pentafluorophenyl Trifluoroacetate

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Pentafluorophenyl Trifluoroacetate is a reagent in the synthesis of multivalent carbohydrate-centered glycoclusters which are used as nanomolar ligands of bacterial lectin LecA from Pseudomonas aeruginosa. Pentafluorophenyl Trifluoroacetate is also used in the preparation of photocrosslinkable dextran hydrogel films as substrates for osteoblast and endothelial cell growth.

Category
Peptide Synthesis Reagents
Catalog number
BAT-006448
CAS number
14533-84-7
Molecular Formula
C8F8O2
Molecular Weight
280.07
Pentafluorophenyl Trifluoroacetate
IUPAC Name
(2,3,4,5,6-pentafluorophenyl) 2,2,2-trifluoroacetate
Synonyms
2,2,2-Trifluoroacetic Acid 2,3,4,5,6-Pentafluorophenyl Ester; Trifluoroacetic Acid Pentafluorophenyl Ester; Perfluorophenyl 2,2,2-trifluoroacetate; PFP-O-TFA; PENTAFLUOROPHENYL TRIFLUOROACETATE; TRIFLUORO ACETIC ACID PENTAFLUORO PHENYL ESTER; TFA-OPFP
Appearance
Clear colorless liquid
Purity
> 95% (GC)
Density
1.630 g/mL at 25 °C
Boiling Point
122.0-123.0 °C
Storage
RT
Solubility
Soluble in Water
InChI
InChI=1S/C8F8O2/c9-1-2(10)4(12)6(5(13)3(1)11)18-7(17)8(14,15)16
InChI Key
VCQURUZYYSOUHP-UHFFFAOYSA-N
Canonical SMILES
C1(=C(C(=C(C(=C1F)F)F)F)F)OC(=O)C(F)(F)F
1.Development and validation of a RP-HPLC method for the estimation of netilmicin sulfate and its related substances using charged aerosol detection.
Joseph A1, Patel S, Rustum A. J Chromatogr Sci. 2010 Aug;48(7):607-12.
Netilmicin is a semi-synthetic aminoglycoside antibiotic used against a broad spectrum of Gram-negative bacteria. A reversed-phase high-performance liquid chromatographic method has been developed to determine the composition of netilmicin sulfate and to estimate its related substances without pre- or post-column derivatization. A UV detector cannot be used to detect low levels of known and unknown related substances of netilmicin, as it has only a weak UV chromophore. A charged aerosol detector was used instead to obtain the high sensitivity that was necessary for the intended purpose of the method. This method can separate all related substances of netilmicin. A (10 cm x 4.6 mm) pentafluorophenyl high-performance liquid chromatographic column from Restek was used with a mobile phase consisting of (A) pentafluoropropionic acid-water-acetonitrile (0.1:96:4, v/v/v) and (B) trifluoroacetic acid-water-acetonitrile (1:96:4, v/v/v).
2.Cyclization enhances function of linear anti-arthritic peptides.
Ali M1, Amon M1, Bender V1, Bolte A1, Separovic F2, Benson H3, Manolios N4. Clin Immunol. 2014 Jan;150(1):121-33. doi: 10.1016/j.clim.2013.10.005. Epub 2013 Oct 12.
This study describes the biophysical and immunomodulatory features of a cyclic peptide termed C1 which consists of alternating d-, l-amino acids and is capable of inhibiting IL-2 production in vitro and reducing the induction and extent of T-cell mediated inflammation in animal models. Solid-state nuclear magnetic resonance demonstrates that the peptide orders the lipid bilayer, suggesting a transmembrane orientation, and this is supported by surface plasmon resonance indicating strong binding affinity of C1 to model membranes. In vitro cell viability and proliferation assays show that C1 does not disrupt the integrity of cell surface membranes. Permeation studies of C1 and analogs across human epidermis cells show that the stability and skin permeability are enhanced by cyclization. Treatment with C1 in an asthma and in an arthritis animal model resulted in a suppressed immune response. Cyclization may be a useful means of enhancing biological linear peptide activity and improving delivery.
3.Critical practical aspects in the application of liquid chromatography-mass spectrometric studies for the characterization of impurities and degradation products.
Narayanam M1, Handa T, Sharma P, Jhajra S, Muthe PK, Dappili PK, Shah RP, Singh S. J Pharm Biomed Anal. 2014 Jan;87:191-217. doi: 10.1016/j.jpba.2013.04.027. Epub 2013 Apr 28.
Liquid chromatography-mass spectrometry (LC-MS) is considered today as a mainstay tool for the structure characterization of minor components like impurities (IMPs) and degradation products (DPs) in drug substances and products. A multi-step systematic strategy for the purpose involves high resolution mass and multi-stage mass studies on both the drug and IMPs/DPs, followed by comparison of their fragmentation profiles. Its successful application requires consideration of many practical aspects at each step. The same are critically discussed in this review.
4.Development and validation of a RP-HPLC method for the determination of gentamicin sulfate and its related substances in a pharmaceutical cream using a short pentafluorophenyl column and a charged aerosol detector.
Joseph A1, Rustum A. J Pharm Biomed Anal. 2010 Feb 5;51(3):521-31. doi: 10.1016/j.jpba.2009.09.002. Epub 2009 Sep 12.
Gentamicin sulfate is a potent broad spectrum aminoglycoside antibiotic which is used as an active pharmaceutical ingredient (API) against both Gram-positive and Gram-negative bacteria. A reversed-phase high performance liquid chromatographic (RP-HPLC) method has been developed and validated to determine the composition of gentamicin sulfate and to estimate its related substances (without any pre- or post-column derivatization) in a pharmaceutical cream. As gentamicin has a weak UV chromophore, it is not possible to detect low levels of known and unknown related substances of gentamicin using a UV detector. In this method, a Charged Aerosol Detector (CAD) was used to obtain high sensitivity that was necessary for the intended purpose of the method. This method can separate all the analogues of gentamicin including all known and unknown related substances of the API. A short (5cmx4.6mm) pentafluorophenyl HPLC column from Restek (Allure PFP) was used with an ion-pair gradient mobile phase consisting of (A) heptafluorobutyric acid:water:acetonitrile (0.
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